Hummm The items on ebay are "caviat emptor" and I also bought a '98 Harrier off there. It was converted to LPG, no documents and above all very cheap......... The vast amounts of engine, wires and computers and the gear box can be a bit frightning at first when they go wrong and with something that complicated they do....... However on the plus side, they are just a pretty looking vehicle and with some common sense they can be fixed. Now as with servicing and fixing all vehicles it is best to use origional manufactures parts. Toyota prices are in fact very reasonable and compare very well with motorfactor copies. There is some " snobbery" in lexus franchises when specifying the Harrier chassis numbers, and there isn't much better luck when you go to toyota. Not withstanding that point out to the chap behind the counter that you have money and that's the reason he is there, they will order bits then. If the pretty thing is rust underneath, then this is expected as it is an import and the japanese models do not get any underseal... very few japanese imports have it. Don't be tempted to slap on some stone chip or whatever as this will just trap moisture etc underneath and make it rot even quicker. Do as one correspondant suggests and use the "rustoil" treatment.
Now that will stop the rot. I would check to make sure the front subfarme is in line with eveything as the slightest knock will put the tracking out and scrub the edge off the front tyres. It will just need some loosening from the body and the use of a portapower to reset it - easy stuff. Now for that engine. The 1MZFE engine is a very good unit, but does suffer from not having its emission system pipes cleaned out, leading to high emission readings at the MOT. Always use a fully synthetic oil to help withthis pipe blocking problem. If we were in the US i think toyota have had to pay up for this small defect but hey we in expensive england. The individual igniters( or ignition coils) do track over giving a misfire. These can be fixed by either placing some high quality silicon tube over the full length of the body, or buying a new one. Starting problems are usually due to the IAC valve needing cleaning out. The flat battery is due to a drain on it. This I find to be the airbag detection system that doesn't switch off after the 6 seconds, always worth a check also check for those aftermarket radio converters that shift the frequency as some persons wire them to the wrong feed so there is always a load on the battery.It could just be a bad battery as well.
As for the gearbox, well if it has been ignored for a while I always drop the pan, and swap the filter and ALWAYS use the correct TOYOTA fluid to refill. If you have a poor MPG and it isn't good at most times, check the rear brake cable as they have a tendancy to bind where they enter the rear brake plate ( Who in TOYOTA decided that putting steel and aluminium alloy together would be a good idea?). The parts to fix the gear box such as clutches springs and stuff are available as a kit in the US for about $390 and this kit fixes most gearbox faults. Getting to it isn't that easy, but then.......... There is a great deal of help out there for those who want to fix a RX300/HARRIER just join this and other excellent forums