Hi there, my first post as well. I have exactly the same issue with my wife's 2010 IS250 in Perth, Western Australia. First sign something was not right was the battery warning light coming on briefly, then going off. Same with the alternator light. A check of the battery showed it was not holding charge so that was replaced. During the replacement process, the alternator output was checked and it was about 12.5 volts regardless of the revs, so obviously the output was not sufficient to maintain the battery. There were no error codes recorded.
I subsequently ordered a replacement alternator from one of our aftermarket suppliers (Repco) and fitted that. It was a bit of a pain and was spread over a couple of days, so the power to the car was disconnected during this time. The pulsing started after this time. After trying a number of things, I accepted defeat and after speaking to the local Lexus service manager, I put it in, based on his recommendation, to have the engine decarboned. Not an inexpensive exercise at $880 Oz. The ECU was also baselined at this point and when I picked it up it seemed to have made a difference.
Unfortunately, it was back again the next day. Spoke to Lexus again and arranged to drop it off for further investigation. They range back to say they thought it was the new alternator which was creating the issue. They tested it by running the car with it pulsing, then connected a second battery to the car battery (via jumper leads) and the problem went away. Disconnect the second battery and problem returned. As we are thinking of selling the car, and the replacement genuine item is $2,700 Oz to supply and fit, I said I would give it some thought and let them know if I decided to go ahead. They said the output from the alternator was like a staggered output sort of like this with ups and downs. ___l----l____l They said that the genuine item was more like a sine wave ~~~~~~.
I haven't had a chance to replicate their testing with the second battery but will look at that in the next day or so. To me the variable output seems to be a function of the regulator which is built into the alternator, but I am no expert. It would seem strange that would be faulty in a new alternator, but I'm sure these things happen. This is the unit I installed OEX Alternator 12V 150A Denso Style - DXA4049
If anyone has any suggestions or comments, I'm all ears.
Cheers
Paul