I personally haven't owned a superchared lexus but have had the pleasure of owning a turbo charged one.
As said earlier there can be lag but it all comes back to your set up and what you want the car for.. I think supercharging is just limiting your power and future upgrades but if your happy with the amount of power that it provides and like the overall cosmetics of the supercharger. I say go for it.
Marus, It is definitly your pump. Dont know what you have in mind with the replacement or whats available over there but try a walbro 500 intank pump.
Very small, very cheap and easy to fit.
As for injectors I think you would be wanting around the 650cc. I wasn't making anymore power at 13psi because I was running out of fuel with 500cc. I upgraded to 750cc and just adjusted the duty cycle. Doesn't miss a beat.
Now just replacing the turbo because I had a internal wastegate and spring wouldn't hold boost past 15psi. It made 335hp @ wheels at 15psi. I'll let you all know what it makes with the new turbo and in my hi lux ute.
Its good to meet a few more ppl with turbo lexus's